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The Genes2Patterns program generates a pattern file from cluster data created by Cluster3 or any other hierarchical clustering software tool. The required files as inputs are .cdt, .gtr and .atr.
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Start the Genes2Patterns program and read in the cluster data generated by a hierarchical clustering program such that Cluster3. Please import the .cdt file into the program. The remaining clustering files (.gtr and *.atr) should be on the same folder and will be automatically read into the program.
Set the parameters:
- 1. Significance threshold
- 2. Minimum number of genes in the generated patterns
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Part of an output pattern file. |
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